Nucleosidic Phosphoramidites

Jump to:

5′-Amino Phosphoramidites

5′-Amino Phosphoramidites bearing a monomethoxytrityl protective group terminate an oligonucleotide with an amino group for further coupling or bioconjugation.

5′-MMTNH-dA(Bz) Phosphoramidite

ItemCat. NoPackPrice
5′-MMTNH-dA(Bz) Phosphoramidite
CAS 184488-14-0 • C46H51N8O5P
FW 826.9 • MC 312.2
102e——
200 mg$140
1000 mg$350

5′-MMTNH-dC(Ac) Phosphoramidite

ItemCat. NoPackPrice
5′-MMTNH-dC(Ac) Phosphoramidite
CAS 125443-93-8 • C40H49N6O6P
FW 740.8 • MC 288.2
102f100 mg$300
200 mg$400
1000 mg$1130

5’-MMTNH-dG(iBu) Phosphoramidite

ItemCat. NoPackPrice
5’-MMTNH-dG(iBu) Phosphoramidite
CAS 125443-93-8 • C40H49N6O6P
FW 740.8 • MC 288.2
1030100 mg$300
200 mg$400
1000 mg$1130

5’-MMTNH-dT Phosphoramidite

ItemCat. NoPackPrice
5’-MMTNH-dT Phosphoramidite
CAS 194034-71-4 • C39H48N5O6P
FW 713.8 • MC 303.2
1031——
200 mg$230
1000 mg$620

Oxopentyl Phosphoramidites

Oxopentyl-modified nucleoside phosphoramidites are designed for the synthesis of oligonucleotides containing a thermolabile 3′-blocking group, which prevents primer hybridization and extension at low temperatures and is automatically removed during high-temperature activation. Oligonucleotides synthesized using these phosphoramidites function as built-in hot-start primers, eliminating premature annealing and nonspecific extension during reaction setup and thermal cycling.

dA(Pac) Oxopentyl Phosphoramidite

ItemCat. NoPackPrice
dA(Pac) Oxopentyl Phosphoramidite
CAS 1097651-25-6 • C50H59N6O9P
FW 919.0 • MC 399.3
ℹ️ Prepare 0.067M solution in dry MeCN. Cap A solution must be the phenoxyacetyl anhydride version of the reagent, not acetic anhydride. Deblock in 0.05M K2CO3 in MeOH, room temp, 16-20 h.
1032——
250 mg$250
500 mg$510

dG(Pac) Oxopentyl Phosphoramidite

ItemCat. NoPackPrice
dG(Pac) Oxopentyl Phosphoramidite
CAS 1097651-27-8 • C50H59N6O10P
FW 935.0 • MC 415.3
ℹ️ Prepare 0.067M solution in mixture of dry dichloromethane : acetonitrile (1:1). Cap A solution must be the phenoxy­acetyl anhydride version of the reagent, not acetic anhydride. Deblock in 0.05M K2CO3 in MeOH, room temp, 16-20 h.
1033——
250 mg$250
500 mg$510

dC(Ac) Oxopentyl Phosphoramidite

ItemCat. NoPackPrice
dC(Ac) Oxopentyl Phosphoramidite
C43H55N4O9P
FW 802.9 • MC 375.3
ℹ️ Prepare 0.067M solution in dry MeCN. Cap A solution must be the phenoxyacetyl anhydride version of the reagent, not acetic anhydride. Deblock in 0.05M K2CO3 in MeOH, room temp, 16-20 h.
1034——
250 mg$250
500 mg$510

dT Oxopentyl Phosphoramidite

ItemCat. NoPackPrice
dT Oxopentyl Phosphoramidite
CAS 370596-61-5 • C42H54N3O9P
FW 775.9 • MC 390.3
ℹ️ Prepare 0.067M solution in dry MeCN. Cap A solution must be the phenoxyacetyl anhydride version of the reagent, not acetic anhydride. Deblock in 0.05M K2CO3 in MeOH, room temp, 16-20 h.
1035——
250 mg$250
500 mg$510

Fluorescent Dye and Quencher Nucleosidic Phosphoramidites

Nucleosidic phosphoramidites are designed to introduce various labels into internal positions of the oligonucleotide during the automated synthesis. The resulting sequence retains its structure and base pairing ability. Also, the nucleosidic label does not affect the exonuclease or polymerase activity. FIDELITY OLIGOS LLC offers the most important nucleosidic phosphoramidites with fluorescent dyes or dye quenchers, alkyne anchor groups for further click conjugation, as well as amine, thiol and NHS functions.

6-FAM C6-dT Phosphoramidite

ItemCat. NoPackPrice
6-FAM C6-dT Phosphoramidite
CAS 1194507-30-6 • C79H89N6O17P
FW 1425.6 • MC 815.2
100c100 mg$390
200 mg$590
1000 mg$1300

6-HEX C6-dT Phosphoramidite

ItemCat. NoPackPrice
6-HEX C6-dT Phosphoramidite
C79H83Cl6N6O17P
FW 1632.2 • MC 1019.0
100d100 mg$460
200 mg$650
1000 mg$1560

BHQ-1 dT Phosphoramidite

ItemCat. NoPackPrice
BHQ-1 dT Phosphoramidite
C74H89N12O13P
FW 1385.6 • MC 943.4
ℹ️ Quenching range 480–580 nm.
100e100 mg$590
200 mg$900
1000 mg$1950

Iowa Black FQ dT Phosphoramidite

ItemCat. NoPackPrice
Iowa Black FQ dT Phosphoramidite
C70H83N10O13P
FW 1303.5 • MC 861.3
ℹ️ Quenching range 420–620 nm.
1012100 mg$590
200 mg$900
1000 mg$1950

Iowa Black RQ dT Phosphoramidite

ItemCat. NoPackPrice
Iowa Black RQ dT Phosphoramidite
C71H79N8O13P
FW 1283.4 • MC 841.3
ℹ️ Quenching range 500–700 nm.
1013100 mg$590
200 mg$900
1000 mg$1950

Alkyne Nucleosidic Phosphoramidites

EdU Phosphoramidite

ItemCat. NoPackPrice
EdU Phosphoramidite
CAS 615288-66-9 • C41H47N4O8P
FW 754.8 • MC 313.0
1014100 mg$390
200 mg$590
1000 mg$1300

5-Octadiynyl dU Phosphoramidite

ItemCat. NoPackPrice
5-Octadiynyl dU Phosphoramidite
CAS 938186-76-6 • C47H55N4O8P
FW 835.0 • MC 393.1
1015100 mg$390
200 mg$590
1000 mg$1300

6-Hexynoic acid alkyne C6-dT Phosphoramidite

ItemCat. NoPackPrice
6-Hexynoic acid alkyne C6-dT Phosphoramidite
C54H69N6O10P
FW 993.2 • MC 551.2
1016100 mg$390
200 mg$590
1000 mg$1300

Other Nucleosidic Phosphoramidites

S-Bz Thiol-Modifier C6-dT Phosphoramidite

ItemCat. NoPackPrice
S-Bz Thiol-Modifier C6-dT Phosphoramidite
C58H71N6O11PS
FW 1091.3 • MC 545.2
100f100 mg$390
200 mg$590
1000 mg$1300

Amino-Modifier C6-dT Phosphoramidite

ItemCat. NoPackPrice
Amino-Modifier C6-dT Phosphoramidite
CAS 210534-16-0 • C50H62F3N6O10P
FW 995.0 • MC 457.2
100b100 mg$390
200 mg$590
1000 mg$1300

NHS carboxy dT Phosphoramidite

ItemCat. NoPackPrice
NHS carboxy dT Phosphoramidite
CAS 1354695-41-2 • C46H52N5O12P
FW 897.9
1017100 mg$390
200 mg$590
1000 mg$1300

RevdT Phosphoramidite

ItemCat. NoPackPrice
RevdT Phosphoramidite
CAS 134031-86-0 • C40H49N4O8P
FW 744.8 • MC 303.0
100a100 mg$90
200 mg$130
1000 mg$260

5′-POM-Vinyl phosphonate 2′-O-Methyl Uridine 3′-CE Phosphoramidite

ItemCat. NoPackPrice
5′-POM-Vinyl phosphonate 2′-O-Methyl Uridine 3′-CE Phosphoramidite
CAS 1882067-09-5 • C32H52N4O13P2
FW 762.7 • MC 624.5
ℹ️ 5’ vinyl phosphonate mimics
5’-phosphorylation.
1011100 mg$140
200 mg$260
1000 mg$1040